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RiceData >>> LOC_Os06g36090 <<< 日本晴

在基因組瀏覽器中顯示LOC_Os06g36090

·基因鑒定

位點名稱：

LOC_Os06g36090

基因產(chǎn)物：

ABC-2 type transporter, putative, expressed

·基因特征

染色體：

Chr06

基因位置：

21113219-21120648 ( - strand)

可變剪接（0個）：

LOC_Os06g36090.1、LOC_Os06g36090.2

剪接本	CDS坐標	核苷酸長度	預(yù)測蛋白長度	預(yù)測分子量	預(yù)測pI	序列
LOC_Os06g36090.1	21113502 ~ 21120105	3504	1168	curing	curing	下載
LOC_Os06g36090.2	21113502 ~ 21120105	3501	1167	curing	curing	下載

將本文分享到：

·基因結(jié)構(gòu)

·GO電子注釋（Gene Ontology）

LOC_Os06g36090.1、LOC_Os06g36090.2
GO登錄號	類型	名稱（描述）	Code	With
GO:0016787	分子功能	hydrolase activity	IEA	TAIR:AT3G16340
GO:0005215	分子功能	transporter activity	IEA	TAIR:AT3G16340
GO:0009056	生物學(xué)進程	catabolic process	IEA	TAIR:AT3G16340
GO:0006139	生物學(xué)進程	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	IEA	TAIR:AT3G16340
GO:0005886	細胞組成	plasma membrane	IEA	TAIR:AT3G16340
GO:0006810	生物學(xué)進程	transport	IEA	TAIR:AT3G16340
GO:0009987	生物學(xué)進程	cellular process	IEA	TAIR:AT3G16340
GO:0016787	分子功能	hydrolase activity	IEA	TAIR:AT3G16340
GO:0005215	分子功能	transporter activity	IEA	TAIR:AT3G16340
GO:0009056	生物學(xué)進程	catabolic process	IEA	TAIR:AT3G16340
GO:0006139	生物學(xué)進程	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	IEA	TAIR:AT3G16340
GO:0005886	細胞組成	plasma membrane	IEA	TAIR:AT3G16340
GO:0006810	生物學(xué)進程	transport	IEA	TAIR:AT3G16340
GO:0009987	生物學(xué)進程	cellular process	IEA	TAIR:AT3G16340

·Interpro蛋白功能預(yù)測

LOC_Os06g36090.1、LOC_Os06g36090.2
方法	登錄號	名稱（描述）	Interpro登錄號	起始匹配位點	終止匹配位點	E值
Gene3D	G3DSA:3.40.50.300	no description	N/A	15	154	1e-08
Gene3D	G3DSA:3.40.50.300	no description	N/A	15	154	1e-08
Gene3D	G3DSA:3.40.50.300	no description	N/A	573	815	1e-28
Gene3D	G3DSA:3.40.50.300	no description	N/A	574	816	1e-28
HMMPanther	PTHR19241:SF10	ATP-BINDING CASSETTE TRANSPORTER (PDR)	N/A	73	1167	N/A
HMMPanther	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	N/A	73	1167	N/A
HMMPanther	PTHR19241:SF10	ATP-BINDING CASSETTE TRANSPORTER (PDR)	N/A	73	1166	N/A
HMMPanther	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	N/A	73	1166	N/A
HMMPfam	PF01061	ABC2_membrane	IPR013525	201	413	4e-40
HMMPfam	PF01061	ABC2_membrane	IPR013525	201	413	4e-40
HMMPfam	PF08370	PDR_assoc	IPR013581	418	486	1.3e-24
HMMPfam	PF08370	PDR_assoc	IPR013581	418	486	1.3e-24
HMMPfam	PF00005	ABC_tran	IPR003439	612	745	8.3e-11
HMMPfam	PF00005	ABC_tran	IPR003439	613	746	8.3e-11
HMMPfam	PF01061	ABC2_membrane	IPR013525	891	1104	4.2e-56
HMMPfam	PF01061	ABC2_membrane	IPR013525	892	1105	4.2e-56
HMMSmart	SM00382	no description	IPR003593	597	794	2.1e-11
HMMSmart	SM00382	no description	IPR003593	598	795	2.1e-11
ProfileScan	PS50893	ABC_TRANSPORTER_2	IPR003439	560	818	13.746
ProfileScan	PS50893	ABC_TRANSPORTER_2	IPR003439	561	819	13.746
Seg	seg	seg	N/A	367	383	N/A
Seg	seg	seg	N/A	367	383	N/A
Seg	seg	seg	N/A	521	539	N/A
Seg	seg	seg	N/A	522	540	N/A
Seg	seg	seg	N/A	1024	1041	N/A
Seg	seg	seg	N/A	1025	1042	N/A
Seg	seg	seg	N/A	1135	1153	N/A
Seg	seg	seg	N/A	1136	1154	N/A
superfamily	SSF52540	P-loop containing nucleoside triphosphate hydrolases	N/A	15	126	2.9e-16
superfamily	SSF52540	P-loop containing nucleoside triphosphate hydrolases	N/A	15	126	2.9e-16
superfamily	SSF52540	P-loop containing nucleoside triphosphate hydrolases	N/A	552	804	1.6e-39
superfamily	SSF52540	P-loop containing nucleoside triphosphate hydrolases	N/A	553	805	1.6e-39
TMHMM	tmhmm	transmembrane_regions	N/A	217	239	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	217	239	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	251	273	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	251	273	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	303	325	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	303	325	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	361	383	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	361	383	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	393	415	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	393	415	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	448	470	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	448	470	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	911	933	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	912	934	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	945	967	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	946	968	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	989	1011	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	990	1012	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	1024	1046	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	1025	1047	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	1056	1075	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	1057	1076	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	1082	1104	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	1083	1105	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	1136	1158	N/A
TMHMM	tmhmm	transmembrane_regions	N/A	1137	1159	N/A

中國農(nóng)業(yè)科學(xué)院作物科學(xué)研究所 | 中國水稻研究所

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