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RiceData >>> LOC_Os04g04330 <<< 日本晴

在基因組瀏覽器中顯示LOC_Os04g04330

·基因鑒定

位點(diǎn)名稱：

LOC_Os04g04330

基因產(chǎn)物：

receptor-like protein kinase 2 precursor, putative, expressed

·基因特征

染色體：

Chr04

基因位置：

2034450-2038826 ( + strand)

可變剪接（0個(gè)）：

LOC_Os04g04330.1、LOC_Os04g04330.2

剪接本	CDS坐標(biāo)	核苷酸長度	預(yù)測蛋白長度	預(yù)測分子量	預(yù)測pI	序列
LOC_Os04g04330.1	2034812 ~ 2038481	3444	1148	curing	curing	下載
LOC_Os04g04330.2	2034812 ~ 2038481	3444	1148	curing	curing	下載

將本文分享到：

·基因結(jié)構(gòu)

·GO電子注釋（Gene Ontology）

LOC_Os04g04330.1、LOC_Os04g04330.2
GO登錄號	類型	名稱（描述）	Code	With
GO:0008152	生物學(xué)進(jìn)程	metabolic process	IEA	TAIR:AT4G26540
GO:0009987	生物學(xué)進(jìn)程	cellular process	IEA	TAIR:AT4G26540
GO:0016301	分子功能	kinase activity	IEA	TAIR:AT4G26540
GO:0006464	生物學(xué)進(jìn)程	protein modification process	IEA	TAIR:AT4G26540
GO:0005886	細(xì)胞組成	plasma membrane	IEA	TAIR:AT4G26540
GO:0008152	生物學(xué)進(jìn)程	metabolic process	IEA	TAIR:AT4G26540
GO:0009987	生物學(xué)進(jìn)程	cellular process	IEA	TAIR:AT4G26540
GO:0016301	分子功能	kinase activity	IEA	TAIR:AT4G26540
GO:0006464	生物學(xué)進(jìn)程	protein modification process	IEA	TAIR:AT4G26540
GO:0005886	細(xì)胞組成	plasma membrane	IEA	TAIR:AT4G26540

·Interpro蛋白功能預(yù)測

LOC_Os04g04330.1、LOC_Os04g04330.2
方法	登錄號	名稱（描述）	Interpro登錄號	起始匹配位點(diǎn)	終止匹配位點(diǎn)	E值
FPrintScan	PR00019	LEURICHRPT	N/A	415	428	9e-06
FPrintScan	PR00019	LEURICHRPT	N/A	415	428	9e-06
FPrintScan	PR00019	LEURICHRPT	N/A	629	642	9e-06
FPrintScan	PR00019	LEURICHRPT	N/A	629	642	9e-06
Gene3D	G3DSA:3.80.10.10	no description	N/A	30	283	4.4e-47
Gene3D	G3DSA:3.80.10.10	no description	N/A	30	283	4.4e-47
Gene3D	G3DSA:3.80.10.10	no description	N/A	285	497	7.3e-60
Gene3D	G3DSA:3.80.10.10	no description	N/A	285	497	7.3e-60
Gene3D	G3DSA:3.80.10.10	no description	N/A	501	698	1.9e-47
Gene3D	G3DSA:3.80.10.10	no description	N/A	501	698	1.9e-47
Gene3D	G3DSA:3.30.200.20	no description	N/A	788	883	4.1e-14
Gene3D	G3DSA:3.30.200.20	no description	N/A	788	883	4.1e-14
Gene3D	G3DSA:1.10.510.10	no description	N/A	884	1092	2.1e-48
Gene3D	G3DSA:1.10.510.10	no description	N/A	884	1092	2.1e-48
HMMPanther	PTHR23258:SF462	LRR RECEPTOR-LIKE KINASE	N/A	54	991	1.1e-270
HMMPanther	PTHR23258	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	N/A	54	991	1.1e-270
HMMPanther	PTHR23258:SF462	LRR RECEPTOR-LIKE KINASE	N/A	54	991	1.1e-270
HMMPanther	PTHR23258	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	N/A	54	991	1.1e-270
HMMPfam	PF00560	LRR_1	IPR001611	125	145	0.23
HMMPfam	PF00560	LRR_1	IPR001611	125	145	0.23
HMMPfam	PF00560	LRR_1	IPR001611	414	434	0.033
HMMPfam	PF00560	LRR_1	IPR001611	414	434	0.033
HMMPfam	PF00560	LRR_1	IPR001611	510	530	0.35
HMMPfam	PF00560	LRR_1	IPR001611	510	530	0.35
HMMPfam	PF00560	LRR_1	IPR001611	582	602	0.45
HMMPfam	PF00560	LRR_1	IPR001611	582	602	0.45
HMMPfam	PF00560	LRR_1	IPR001611	654	672	0.27
HMMPfam	PF00560	LRR_1	IPR001611	654	672	0.27
HMMPfam	PF00069	Pkinase	IPR017442	798	1032	1.2e-38
HMMPfam	PF00069	Pkinase	IPR017442	798	1032	1.2e-38
HMMSmart	SM00369	no description	IPR003591	220	244	390
HMMSmart	SM00369	no description	IPR003591	220	244	390
HMMSmart	SM00369	no description	IPR003591	292	315	89
HMMSmart	SM00369	no description	IPR003591	292	315	89
HMMSmart	SM00369	no description	IPR003591	316	339	150
HMMSmart	SM00369	no description	IPR003591	316	339	150
HMMSmart	SM00369	no description	IPR003591	340	364	23
HMMSmart	SM00369	no description	IPR003591	340	364	23
HMMSmart	SM00369	no description	IPR003591	412	436	0.11
HMMSmart	SM00369	no description	IPR003591	412	436	0.11
HMMSmart	SM00369	no description	IPR003591	508	531	140
HMMSmart	SM00369	no description	IPR003591	508	531	140
HMMSmart	SM00369	no description	IPR003591	532	555	75
HMMSmart	SM00369	no description	IPR003591	532	555	75
HMMSmart	SM00369	no description	IPR003591	556	580	55
HMMSmart	SM00369	no description	IPR003591	556	580	55
HMMSmart	SM00369	no description	IPR003591	581	604	300
HMMSmart	SM00369	no description	IPR003591	581	604	300
HMMSmart	SM00369	no description	IPR003591	629	648	320
HMMSmart	SM00369	no description	IPR003591	629	648	320
HMMSmart	SM00369	no description	IPR003591	652	677	97
HMMSmart	SM00369	no description	IPR003591	652	677	97
HMMSmart	SM00219	no description	IPR020635	794	1081	2.1e-15
HMMSmart	SM00220	no description	IPR002290	794	1081	2.8e-20
HMMSmart	SM00219	no description	IPR020635	794	1081	2.1e-15
HMMSmart	SM00220	no description	IPR002290	794	1081	2.8e-20
PatternScan	PS00107	PROTEIN_KINASE_ATP	IPR017441	800	823	N/A
PatternScan	PS00107	PROTEIN_KINASE_ATP	IPR017441	800	823	N/A
PatternScan	PS00108	PROTEIN_KINASE_ST	IPR008271	933	945	N/A
PatternScan	PS00108	PROTEIN_KINASE_ST	IPR008271	933	945	N/A
ProfileScan	PS50011	PROTEIN_KINASE_DOM	IPR000719	794	1086	35.481
ProfileScan	PS50011	PROTEIN_KINASE_DOM	IPR000719	794	1086	35.481
Seg	seg	seg	N/A	3	28	N/A
Seg	seg	seg	N/A	3	28	N/A
Seg	seg	seg	N/A	190	204	N/A
Seg	seg	seg	N/A	190	204	N/A
Seg	seg	seg	N/A	280	293	N/A
Seg	seg	seg	N/A	280	293	N/A
Seg	seg	seg	N/A	435	449	N/A
Seg	seg	seg	N/A	435	449	N/A
Seg	seg	seg	N/A	640	655	N/A
Seg	seg	seg	N/A	640	655	N/A
Seg	seg	seg	N/A	724	738	N/A
Seg	seg	seg	N/A	724	738	N/A
Seg	seg	seg	N/A	748	769	N/A
Seg	seg	seg	N/A	748	769	N/A
Seg	seg	seg	N/A	896	903	N/A
Seg	seg	seg	N/A	896	903	N/A
Seg	seg	seg	N/A	1100	1133	N/A
Seg	seg	seg	N/A	1100	1133	N/A
SignalPHMM	SignalP-NN(euk)	signal-peptide	N/A	1	31	N/A
SignalPHMM	SignalP-NN(euk)	signal-peptide	N/A	1	31	N/A
superfamily	SSF52058	L domain-like	N/A	53	406	2e-72
superfamily	SSF52058	L domain-like	N/A	53	406	2e-72
superfamily	SSF52058	L domain-like	N/A	403	691	2.2e-64
superfamily	SSF52058	L domain-like	N/A	403	691	2.2e-64
superfamily	SSF56112	Protein kinase-like (PK-like)	IPR011009	764	1089	1.8e-70
superfamily	SSF56112	Protein kinase-like (PK-like)	IPR011009	764	1089	1.8e-70

中國農(nóng)業(yè)科學(xué)院作物科學(xué)研究所 | 中國水稻研究所

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